Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG15863.1 | SDG61802.1 | SAMN05216605_101300 | SAMN05216605_102575 | VCBS repeat-containing protein. | SH3 domain protein. | 0.541 |
SDG15863.1 | SDG81144.1 | SAMN05216605_101300 | SAMN05216605_103219 | VCBS repeat-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.630 |
SDG15863.1 | SDI10124.1 | SAMN05216605_101300 | SAMN05216605_110200 | VCBS repeat-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.630 |
SDG15863.1 | SDJ35544.1 | SAMN05216605_101300 | SAMN05216605_12722 | VCBS repeat-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.630 |
SDG18019.1 | SDG61802.1 | SAMN05216605_101350 | SAMN05216605_102575 | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | SH3 domain protein. | 0.530 |
SDG18019.1 | guaA | SAMN05216605_101350 | SAMN05216605_105317 | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.708 |
SDG18019.1 | guaB | SAMN05216605_101350 | SAMN05216605_105318 | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.811 |
SDG61802.1 | SDG15863.1 | SAMN05216605_102575 | SAMN05216605_101300 | SH3 domain protein. | VCBS repeat-containing protein. | 0.541 |
SDG61802.1 | SDG18019.1 | SAMN05216605_102575 | SAMN05216605_101350 | SH3 domain protein. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | 0.530 |
SDG61802.1 | SDG78202.1 | SAMN05216605_102575 | SAMN05216605_103140 | SH3 domain protein. | Hypothetical protein. | 0.565 |
SDG61802.1 | SDG81144.1 | SAMN05216605_102575 | SAMN05216605_103219 | SH3 domain protein. | N-acetylmuramoyl-L-alanine amidase. | 0.776 |
SDG61802.1 | SDI10124.1 | SAMN05216605_102575 | SAMN05216605_110200 | SH3 domain protein. | N-acetylmuramoyl-L-alanine amidase. | 0.773 |
SDG61802.1 | SDJ35544.1 | SAMN05216605_102575 | SAMN05216605_12722 | SH3 domain protein. | N-acetylmuramoyl-L-alanine amidase. | 0.744 |
SDG61802.1 | guaA | SAMN05216605_102575 | SAMN05216605_105317 | SH3 domain protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.784 |
SDG61802.1 | guaB | SAMN05216605_102575 | SAMN05216605_105318 | SH3 domain protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.544 |
SDG61802.1 | ppnP | SAMN05216605_102575 | SAMN05216605_12237 | SH3 domain protein. | Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.543 |
SDG61802.1 | thyA | SAMN05216605_102575 | SAMN05216605_1039 | SH3 domain protein. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.524 |
SDG78202.1 | SDG61802.1 | SAMN05216605_103140 | SAMN05216605_102575 | Hypothetical protein. | SH3 domain protein. | 0.565 |
SDG81144.1 | SDG15863.1 | SAMN05216605_103219 | SAMN05216605_101300 | N-acetylmuramoyl-L-alanine amidase. | VCBS repeat-containing protein. | 0.630 |
SDG81144.1 | SDG61802.1 | SAMN05216605_103219 | SAMN05216605_102575 | N-acetylmuramoyl-L-alanine amidase. | SH3 domain protein. | 0.776 |
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