Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG07739.1 | SDG79549.1 | SAMN05216605_10188 | SAMN05216605_103177 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycosyl transferases group 1. | 0.709 |
SDG07739.1 | SDG79584.1 | SAMN05216605_10188 | SAMN05216605_103178 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Alpha-1,6-rhamnosyltransferase. | 0.789 |
SDG07739.1 | SDG79620.1 | SAMN05216605_10188 | SAMN05216605_103179 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | O-antigen ligase. | 0.578 |
SDG07739.1 | SDH36293.1 | SAMN05216605_10188 | SAMN05216605_10658 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | dTDP-glucose 4,6-dehydratase/UDP-glucose 4-epimerase. | 0.906 |
SDG07739.1 | SDH36421.1 | SAMN05216605_10188 | SAMN05216605_10660 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycosyl transferase family 2. | 0.789 |
SDG07739.1 | SDI69555.1 | SAMN05216605_10188 | SAMN05216605_11614 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | UDP-glucose 4-epimerase. | 0.906 |
SDG07739.1 | SDJ16156.1 | SAMN05216605_10188 | SAMN05216605_12268 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.730 |
SDG07739.1 | SDJ16335.1 | SAMN05216605_10188 | SAMN05216605_12273 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.709 |
SDG07739.1 | arnA | SAMN05216605_10188 | SAMN05216605_102334 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily. | 0.959 |
SDG07739.1 | gmd | SAMN05216605_10188 | SAMN05216605_10653 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.670 |
SDG79549.1 | SDG07739.1 | SAMN05216605_103177 | SAMN05216605_10188 | Glycosyl transferases group 1. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.709 |
SDG79549.1 | SDG79584.1 | SAMN05216605_103177 | SAMN05216605_103178 | Glycosyl transferases group 1. | Alpha-1,6-rhamnosyltransferase. | 0.591 |
SDG79549.1 | SDG79620.1 | SAMN05216605_103177 | SAMN05216605_103179 | Glycosyl transferases group 1. | O-antigen ligase. | 0.702 |
SDG79549.1 | SDJ16156.1 | SAMN05216605_103177 | SAMN05216605_12268 | Glycosyl transferases group 1. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.721 |
SDG79584.1 | SDG07739.1 | SAMN05216605_103178 | SAMN05216605_10188 | Alpha-1,6-rhamnosyltransferase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.789 |
SDG79584.1 | SDG79549.1 | SAMN05216605_103178 | SAMN05216605_103177 | Alpha-1,6-rhamnosyltransferase. | Glycosyl transferases group 1. | 0.591 |
SDG79584.1 | SDG79620.1 | SAMN05216605_103178 | SAMN05216605_103179 | Alpha-1,6-rhamnosyltransferase. | O-antigen ligase. | 0.790 |
SDG79584.1 | SDH36293.1 | SAMN05216605_103178 | SAMN05216605_10658 | Alpha-1,6-rhamnosyltransferase. | dTDP-glucose 4,6-dehydratase/UDP-glucose 4-epimerase. | 0.696 |
SDG79584.1 | SDH36421.1 | SAMN05216605_103178 | SAMN05216605_10660 | Alpha-1,6-rhamnosyltransferase. | Glycosyl transferase family 2. | 0.744 |
SDG79584.1 | SDI69555.1 | SAMN05216605_103178 | SAMN05216605_11614 | Alpha-1,6-rhamnosyltransferase. | UDP-glucose 4-epimerase. | 0.603 |
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