STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG82442.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (377 aa)    
Predicted Functional Partners:
SDH63268.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
SDG82520.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.990
SDG82555.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 0.983
SDG82484.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.977
SDH45440.1
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.976
SDG82589.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Belongs to the ABC transporter superfamily.
 
 
 0.965
SDH45397.1
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.961
SDH45474.1
L-leucine ABC transporter ATP-binding protein.
 
 
 0.959
SDH63231.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.947
SDH45515.1
L-leucine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.939
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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