Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH02283.1 | SDH02680.1 | SAMN05216605_104130 | SAMN05216605_104141 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Ferredoxin-NADP reductase. | 0.989 |
SDH02283.1 | SDH02710.1 | SAMN05216605_104130 | SAMN05216605_104142 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Rieske 2Fe-2S family protein. | 0.967 |
SDH02283.1 | SDH02789.1 | SAMN05216605_104130 | SAMN05216605_104144 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Electron transfer flavoprotein beta subunit. | 0.886 |
SDH02283.1 | SDH02841.1 | SAMN05216605_104130 | SAMN05216605_104145 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.779 |
SDH02283.1 | SDH02881.1 | SAMN05216605_104130 | SAMN05216605_104146 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Fe-S oxidoreductase. | 0.935 |
SDH02283.1 | SDH02923.1 | SAMN05216605_104130 | SAMN05216605_104147 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Hypothetical protein. | 0.899 |
SDH02283.1 | SDH02961.1 | SAMN05216605_104130 | SAMN05216605_104148 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Hypothetical protein. | 0.864 |
SDH02283.1 | SDH02996.1 | SAMN05216605_104130 | SAMN05216605_104149 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Membrane dipeptidase. | 0.800 |
SDH02680.1 | SDH02283.1 | SAMN05216605_104141 | SAMN05216605_104130 | Ferredoxin-NADP reductase. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.989 |
SDH02680.1 | SDH02710.1 | SAMN05216605_104141 | SAMN05216605_104142 | Ferredoxin-NADP reductase. | Rieske 2Fe-2S family protein. | 0.993 |
SDH02680.1 | SDH02789.1 | SAMN05216605_104141 | SAMN05216605_104144 | Ferredoxin-NADP reductase. | Electron transfer flavoprotein beta subunit. | 0.943 |
SDH02680.1 | SDH02841.1 | SAMN05216605_104141 | SAMN05216605_104145 | Ferredoxin-NADP reductase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.788 |
SDH02680.1 | SDH02881.1 | SAMN05216605_104141 | SAMN05216605_104146 | Ferredoxin-NADP reductase. | Fe-S oxidoreductase. | 0.937 |
SDH02680.1 | SDH02923.1 | SAMN05216605_104141 | SAMN05216605_104147 | Ferredoxin-NADP reductase. | Hypothetical protein. | 0.987 |
SDH02680.1 | SDH02961.1 | SAMN05216605_104141 | SAMN05216605_104148 | Ferredoxin-NADP reductase. | Hypothetical protein. | 0.921 |
SDH02680.1 | SDH02996.1 | SAMN05216605_104141 | SAMN05216605_104149 | Ferredoxin-NADP reductase. | Membrane dipeptidase. | 0.850 |
SDH02680.1 | SDH76925.1 | SAMN05216605_104141 | SAMN05216605_10890 | Ferredoxin-NADP reductase. | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.400 |
SDH02680.1 | SDI30589.1 | SAMN05216605_104141 | SAMN05216605_11256 | Ferredoxin-NADP reductase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.862 |
SDH02710.1 | SDH02283.1 | SAMN05216605_104142 | SAMN05216605_104130 | Rieske 2Fe-2S family protein. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.967 |
SDH02710.1 | SDH02680.1 | SAMN05216605_104142 | SAMN05216605_104141 | Rieske 2Fe-2S family protein. | Ferredoxin-NADP reductase. | 0.993 |
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