STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG98051.1Alcohol dehydrogenase, class IV. (387 aa)    
Predicted Functional Partners:
SDH25551.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.958
SDG60384.1
Alcohol dehydrogenase, propanol-preferring.
  
 0.883
SDG22749.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 0.846
SDH66559.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 0.846
SDH76925.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 
 0.839
SDG58117.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.816
SDG62980.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.816
SDG76236.1
Glutamate synthase (NADPH) large subunit.
   
 
 0.813
SDI09415.1
Pyruvate carboxylase subunit B.
    
 0.784
SDI03572.1
CDP-4-dehydro-6-deoxyglucose reductase.
    
 0.770
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.