Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG07739.1 | SDG64335.1 | SAMN05216605_10188 | SAMN05216605_102670 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | rubredoxin-NAD+ reductase. | 0.864 |
SDG07739.1 | SDG76236.1 | SAMN05216605_10188 | SAMN05216605_10380 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glutamate synthase (NADPH) large subunit. | 0.882 |
SDG07739.1 | SDG78035.1 | SAMN05216605_10188 | SAMN05216605_103135 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.939 |
SDG07739.1 | SDH08188.1 | SAMN05216605_10188 | SAMN05216605_104276 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | L-glutamine synthetase. | 0.834 |
SDG07739.1 | SDH94538.1 | SAMN05216605_10188 | SAMN05216605_109166 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.817 |
SDG07739.1 | SDI07873.1 | SAMN05216605_10188 | SAMN05216605_110142 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Rubredoxin. | 0.880 |
SDG07739.1 | gcvP | SAMN05216605_10188 | SAMN05216605_108203 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.535 |
SDG07739.1 | gcvP-2 | SAMN05216605_10188 | SAMN05216605_1107 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.535 |
SDG07739.1 | guaA | SAMN05216605_10188 | SAMN05216605_105317 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.506 |
SDG07739.1 | purL | SAMN05216605_10188 | SAMN05216605_105311 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.894 |
SDG64335.1 | SDG07739.1 | SAMN05216605_102670 | SAMN05216605_10188 | rubredoxin-NAD+ reductase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.864 |
SDG64335.1 | SDG76236.1 | SAMN05216605_102670 | SAMN05216605_10380 | rubredoxin-NAD+ reductase. | Glutamate synthase (NADPH) large subunit. | 0.914 |
SDG64335.1 | SDH08188.1 | SAMN05216605_102670 | SAMN05216605_104276 | rubredoxin-NAD+ reductase. | L-glutamine synthetase. | 0.767 |
SDG64335.1 | SDH94538.1 | SAMN05216605_102670 | SAMN05216605_109166 | rubredoxin-NAD+ reductase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.999 |
SDG64335.1 | SDI07873.1 | SAMN05216605_102670 | SAMN05216605_110142 | rubredoxin-NAD+ reductase. | Rubredoxin. | 0.999 |
SDG64335.1 | gcvP | SAMN05216605_102670 | SAMN05216605_108203 | rubredoxin-NAD+ reductase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.683 |
SDG64335.1 | gcvP-2 | SAMN05216605_102670 | SAMN05216605_1107 | rubredoxin-NAD+ reductase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.683 |
SDG76236.1 | SDG07739.1 | SAMN05216605_10380 | SAMN05216605_10188 | Glutamate synthase (NADPH) large subunit. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.882 |
SDG76236.1 | SDG64335.1 | SAMN05216605_10380 | SAMN05216605_102670 | Glutamate synthase (NADPH) large subunit. | rubredoxin-NAD+ reductase. | 0.914 |
SDG76236.1 | SDG78035.1 | SAMN05216605_10380 | SAMN05216605_103135 | Glutamate synthase (NADPH) large subunit. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.881 |
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