STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH46853.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
SDH46818.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
       0.727
SDH46777.1
Hypothetical protein.
       0.702
SDH46709.1
Amino acid ABC transporter membrane protein 1, PAAT family.
       0.692
SDH46744.1
Amino acid ABC transporter membrane protein 2, PAAT family.
       0.692
SDH46889.1
ATP-dependent helicase Lhr and Lhr-like helicase.
       0.620
SDH46929.1
Putative phosphoesterase.
       0.620
SDH46666.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
       0.496
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.