Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDG63498.1 | SDI52184.1 | SAMN05216605_102641 | SAMN05216605_11475 | 4-hydroxyphenylpyruvate dioxygenase. | Xylulokinase; Belongs to the FGGY kinase family. | 0.745 |
| SDG63498.1 | xylA | SAMN05216605_102641 | SAMN05216605_10174 | 4-hydroxyphenylpyruvate dioxygenase. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.497 |
| SDG63498.1 | xylB | SAMN05216605_102641 | SAMN05216605_107189 | 4-hydroxyphenylpyruvate dioxygenase. | Xylulokinase. | 0.745 |
| SDG63498.1 | xylB-2 | SAMN05216605_102641 | SAMN05216605_11569 | 4-hydroxyphenylpyruvate dioxygenase. | Xylulokinase. | 0.745 |
| SDG97959.1 | SDH03585.1 | SAMN05216605_10424 | SAMN05216605_104164 | Ribulose-5-phosphate 3-epimerase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.917 |
| SDG97959.1 | SDI43524.1 | SAMN05216605_10424 | SAMN05216605_113119 | Ribulose-5-phosphate 3-epimerase. | Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family. | 0.539 |
| SDG97959.1 | SDI52184.1 | SAMN05216605_10424 | SAMN05216605_11475 | Ribulose-5-phosphate 3-epimerase. | Xylulokinase; Belongs to the FGGY kinase family. | 0.739 |
| SDG97959.1 | SDI62441.1 | SAMN05216605_10424 | SAMN05216605_11568 | Ribulose-5-phosphate 3-epimerase. | Mannitol 2-dehydrogenase/xylulokinase. | 0.648 |
| SDG97959.1 | xylB | SAMN05216605_10424 | SAMN05216605_107189 | Ribulose-5-phosphate 3-epimerase. | Xylulokinase. | 0.722 |
| SDG97959.1 | xylB-2 | SAMN05216605_10424 | SAMN05216605_11569 | Ribulose-5-phosphate 3-epimerase. | Xylulokinase. | 0.730 |
| SDH03585.1 | SDG97959.1 | SAMN05216605_104164 | SAMN05216605_10424 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Ribulose-5-phosphate 3-epimerase. | 0.917 |
| SDH03585.1 | SDH62899.1 | SAMN05216605_104164 | SAMN05216605_107190 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Transcriptional regulator, LacI family. | 0.428 |
| SDH03585.1 | SDI43524.1 | SAMN05216605_104164 | SAMN05216605_113119 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family. | 0.889 |
| SDH03585.1 | SDI52184.1 | SAMN05216605_104164 | SAMN05216605_11475 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Xylulokinase; Belongs to the FGGY kinase family. | 0.401 |
| SDH03585.1 | SDI62441.1 | SAMN05216605_104164 | SAMN05216605_11568 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Mannitol 2-dehydrogenase/xylulokinase. | 0.490 |
| SDH03585.1 | xylB | SAMN05216605_104164 | SAMN05216605_107189 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Xylulokinase. | 0.664 |
| SDH03585.1 | xylB-2 | SAMN05216605_104164 | SAMN05216605_11569 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Xylulokinase. | 0.724 |
| SDH62899.1 | SDH03585.1 | SAMN05216605_107190 | SAMN05216605_104164 | Transcriptional regulator, LacI family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.428 |
| SDH62899.1 | SDI43524.1 | SAMN05216605_107190 | SAMN05216605_113119 | Transcriptional regulator, LacI family. | Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family. | 0.969 |
| SDH62899.1 | SDI52184.1 | SAMN05216605_107190 | SAMN05216605_11475 | Transcriptional regulator, LacI family. | Xylulokinase; Belongs to the FGGY kinase family. | 0.495 |
page 1 of 4