Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG47283.1 | SDG47314.1 | SAMN05216605_102181 | SAMN05216605_102182 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome c oxidase cbb3-type subunit 1. | 0.999 |
SDG47283.1 | SDI17785.1 | SAMN05216605_102181 | SAMN05216605_11140 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.997 |
SDG47283.1 | SDI17851.1 | SAMN05216605_102181 | SAMN05216605_11142 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome c oxidase cbb3-type subunit 4. | 0.961 |
SDG47283.1 | SDI17886.1 | SAMN05216605_102181 | SAMN05216605_11143 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.999 |
SDG47283.1 | SDI17967.1 | SAMN05216605_102181 | SAMN05216605_11145 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome c oxidase accessory protein FixG. | 0.973 |
SDG47283.1 | SDI18037.1 | SAMN05216605_102181 | SAMN05216605_11147 | Cytochrome c oxidase cbb3-type subunit 2. | Cu2+-exporting ATPase. | 0.408 |
SDG47283.1 | SDI18068.1 | SAMN05216605_102181 | SAMN05216605_11148 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome oxidase maturation protein, cbb3-type. | 0.788 |
SDG47283.1 | SDI18138.1 | SAMN05216605_102181 | SAMN05216605_11149 | Cytochrome c oxidase cbb3-type subunit 2. | Hypothetical protein. | 0.730 |
SDG47314.1 | SDG47283.1 | SAMN05216605_102182 | SAMN05216605_102181 | Cytochrome c oxidase cbb3-type subunit 1. | Cytochrome c oxidase cbb3-type subunit 2. | 0.999 |
SDG47314.1 | SDI17785.1 | SAMN05216605_102182 | SAMN05216605_11140 | Cytochrome c oxidase cbb3-type subunit 1. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.511 |
SDG47314.1 | SDI17824.1 | SAMN05216605_102182 | SAMN05216605_11141 | Cytochrome c oxidase cbb3-type subunit 1. | Cytochrome c oxidase cbb3-type subunit 2. | 0.999 |
SDG47314.1 | SDI17851.1 | SAMN05216605_102182 | SAMN05216605_11142 | Cytochrome c oxidase cbb3-type subunit 1. | Cytochrome c oxidase cbb3-type subunit 4. | 0.961 |
SDG47314.1 | SDI17886.1 | SAMN05216605_102182 | SAMN05216605_11143 | Cytochrome c oxidase cbb3-type subunit 1. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.999 |
SDG47314.1 | SDI17967.1 | SAMN05216605_102182 | SAMN05216605_11145 | Cytochrome c oxidase cbb3-type subunit 1. | Cytochrome c oxidase accessory protein FixG. | 0.964 |
SDG47314.1 | SDI18037.1 | SAMN05216605_102182 | SAMN05216605_11147 | Cytochrome c oxidase cbb3-type subunit 1. | Cu2+-exporting ATPase. | 0.401 |
SDG47314.1 | SDI18068.1 | SAMN05216605_102182 | SAMN05216605_11148 | Cytochrome c oxidase cbb3-type subunit 1. | Cytochrome oxidase maturation protein, cbb3-type. | 0.775 |
SDG47314.1 | SDI18138.1 | SAMN05216605_102182 | SAMN05216605_11149 | Cytochrome c oxidase cbb3-type subunit 1. | Hypothetical protein. | 0.736 |
SDI17785.1 | SDG47283.1 | SAMN05216605_11140 | SAMN05216605_102181 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase cbb3-type subunit 2. | 0.997 |
SDI17785.1 | SDG47314.1 | SAMN05216605_11140 | SAMN05216605_102182 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase cbb3-type subunit 1. | 0.511 |
SDI17785.1 | SDI17824.1 | SAMN05216605_11140 | SAMN05216605_11141 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase cbb3-type subunit 2. | 0.999 |
page 1 of 6