STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI39752.1Phage tail assembly chaperone, TAC. (144 aa)    
Predicted Functional Partners:
SDI39788.1
Phage tail tube, TTP, lambda-like.
       0.808
SDI39635.1
Phage-related protein.
       0.780
SDI39573.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
       0.779
SDI39671.1
Phage tail tape measure protein, lambda family.
       0.777
SDI39600.1
Lambda-like phage minor tail protein L.
       0.774
SDI39720.1
Hypothetical protein.
       0.773
SDI39535.1
Hypothetical protein.
       0.701
SDI39826.1
Protein of unknown function.
       0.614
SDI39865.1
Phage protein, HK97 gp10 family.
       0.613
SDI39906.1
Phage head-tail adaptor, putative, SPP1 family.
  
    0.605
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.