Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG07739.1 | SDH36663.1 | SAMN05216605_10188 | SAMN05216605_10665 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Chorismate mutase. | 0.796 |
SDG07739.1 | SDH94538.1 | SAMN05216605_10188 | SAMN05216605_109166 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.817 |
SDG07739.1 | SDI64185.1 | SAMN05216605_10188 | SAMN05216605_115114 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Cyanate permease. | 0.710 |
SDG07739.1 | SDI64225.1 | SAMN05216605_10188 | SAMN05216605_115115 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Trehalose synthase. | 0.450 |
SDH28580.1 | SDH36663.1 | SAMN05216605_105293 | SAMN05216605_10665 | Homoserine dehydrogenase. | Chorismate mutase. | 0.911 |
SDH28580.1 | SDI64185.1 | SAMN05216605_105293 | SAMN05216605_115114 | Homoserine dehydrogenase. | Cyanate permease. | 0.631 |
SDH36663.1 | SDG07739.1 | SAMN05216605_10665 | SAMN05216605_10188 | Chorismate mutase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.796 |
SDH36663.1 | SDH28580.1 | SAMN05216605_10665 | SAMN05216605_105293 | Chorismate mutase. | Homoserine dehydrogenase. | 0.911 |
SDH36663.1 | SDI64185.1 | SAMN05216605_10665 | SAMN05216605_115114 | Chorismate mutase. | Cyanate permease. | 0.474 |
SDH94538.1 | SDG07739.1 | SAMN05216605_109166 | SAMN05216605_10188 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.817 |
SDH94538.1 | SDI64185.1 | SAMN05216605_109166 | SAMN05216605_115114 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Cyanate permease. | 0.464 |
SDI64140.1 | SDI64185.1 | SAMN05216605_115113 | SAMN05216605_115114 | Hypothetical protein. | Cyanate permease. | 0.512 |
SDI64140.1 | SDI64225.1 | SAMN05216605_115113 | SAMN05216605_115115 | Hypothetical protein. | Trehalose synthase. | 0.512 |
SDI64185.1 | SDG07739.1 | SAMN05216605_115114 | SAMN05216605_10188 | Cyanate permease. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.710 |
SDI64185.1 | SDH28580.1 | SAMN05216605_115114 | SAMN05216605_105293 | Cyanate permease. | Homoserine dehydrogenase. | 0.631 |
SDI64185.1 | SDH36663.1 | SAMN05216605_115114 | SAMN05216605_10665 | Cyanate permease. | Chorismate mutase. | 0.474 |
SDI64185.1 | SDH94538.1 | SAMN05216605_115114 | SAMN05216605_109166 | Cyanate permease. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.464 |
SDI64185.1 | SDI64140.1 | SAMN05216605_115114 | SAMN05216605_115113 | Cyanate permease. | Hypothetical protein. | 0.512 |
SDI64185.1 | SDI64225.1 | SAMN05216605_115114 | SAMN05216605_115115 | Cyanate permease. | Trehalose synthase. | 0.773 |
SDI64185.1 | SDI64265.1 | SAMN05216605_115114 | SAMN05216605_115116 | Cyanate permease. | L-lysine exporter family protein LysE/ArgO. | 0.410 |
page 1 of 2