STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI64952.1Protein of unknown function. (91 aa)    
Predicted Functional Partners:
SDI64993.1
Hypothetical protein.
       0.462
SDI64719.1
Hypothetical protein.
       0.417
SDI64756.1
Signal transduction histidine kinase.
       0.417
SDI64784.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
       0.417
SDI64824.1
Serine/threonine-protein kinase RsbT.
       0.417
SDI64869.1
rsbT antagonist protein RsbS.
       0.417
SDI64913.1
rsbT co-antagonist protein RsbR.
       0.417
Your Current Organism:
Pseudomonas abietaniphila
NCBI taxonomy Id: 89065
Other names: ATCC 700689, CCUG 50779, CIP 106708, P. abietaniphila, strain BKME-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.