Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH80164.1 | SDI04792.1 | SAMN05216605_108175 | SAMN05216605_11059 | Molybdopterin synthase catalytic subunit. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.477 |
SDH80164.1 | SDI86100.1 | SAMN05216605_108175 | SAMN05216605_11840 | Molybdopterin synthase catalytic subunit. | Trk system potassium uptake protein TrkA. | 0.853 |
SDH80164.1 | selA | SAMN05216605_108175 | SAMN05216605_102578 | Molybdopterin synthase catalytic subunit. | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | 0.499 |
SDI04792.1 | SDH80164.1 | SAMN05216605_11059 | SAMN05216605_108175 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Molybdopterin synthase catalytic subunit. | 0.477 |
SDI04792.1 | SDI86100.1 | SAMN05216605_11059 | SAMN05216605_11840 | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Trk system potassium uptake protein TrkA. | 0.760 |
SDI81807.1 | SDI86100.1 | SAMN05216605_117140 | SAMN05216605_11840 | Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | Trk system potassium uptake protein TrkA. | 0.998 |
SDI86012.1 | SDI86052.1 | SAMN05216605_11838 | SAMN05216605_11839 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.714 |
SDI86012.1 | SDI86100.1 | SAMN05216605_11838 | SAMN05216605_11840 | Hypothetical protein. | Trk system potassium uptake protein TrkA. | 0.685 |
SDI86012.1 | SDI86136.1 | SAMN05216605_11838 | SAMN05216605_11841 | Hypothetical protein. | 16S rRNA m(5)C-967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.414 |
SDI86012.1 | fmt | SAMN05216605_11838 | SAMN05216605_11842 | Hypothetical protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.414 |
SDI86052.1 | SDI86012.1 | SAMN05216605_11839 | SAMN05216605_11838 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.714 |
SDI86052.1 | SDI86100.1 | SAMN05216605_11839 | SAMN05216605_11840 | Tetratricopeptide repeat-containing protein. | Trk system potassium uptake protein TrkA. | 0.781 |
SDI86052.1 | SDI86136.1 | SAMN05216605_11839 | SAMN05216605_11841 | Tetratricopeptide repeat-containing protein. | 16S rRNA m(5)C-967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.529 |
SDI86052.1 | fmt | SAMN05216605_11839 | SAMN05216605_11842 | Tetratricopeptide repeat-containing protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.529 |
SDI86100.1 | SDH80164.1 | SAMN05216605_11840 | SAMN05216605_108175 | Trk system potassium uptake protein TrkA. | Molybdopterin synthase catalytic subunit. | 0.853 |
SDI86100.1 | SDI04792.1 | SAMN05216605_11840 | SAMN05216605_11059 | Trk system potassium uptake protein TrkA. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.760 |
SDI86100.1 | SDI81807.1 | SAMN05216605_11840 | SAMN05216605_117140 | Trk system potassium uptake protein TrkA. | Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | 0.998 |
SDI86100.1 | SDI86012.1 | SAMN05216605_11840 | SAMN05216605_11838 | Trk system potassium uptake protein TrkA. | Hypothetical protein. | 0.685 |
SDI86100.1 | SDI86052.1 | SAMN05216605_11840 | SAMN05216605_11839 | Trk system potassium uptake protein TrkA. | Tetratricopeptide repeat-containing protein. | 0.781 |
SDI86100.1 | SDI86136.1 | SAMN05216605_11840 | SAMN05216605_11841 | Trk system potassium uptake protein TrkA. | 16S rRNA m(5)C-967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.847 |
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