Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG19377.1 | SDI92622.1 | SAMN05216605_101383 | SAMN05216605_11919 | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | Hypothetical protein. | 0.407 |
SDG80163.1 | SDH89662.1 | SAMN05216605_103194 | SAMN05216605_10920 | Protein of unknown function. | Protein of unknown function. | 0.601 |
SDG80163.1 | SDI92622.1 | SAMN05216605_103194 | SAMN05216605_11919 | Protein of unknown function. | Hypothetical protein. | 0.536 |
SDH83260.1 | SDI92622.1 | SAMN05216605_108251 | SAMN05216605_11919 | Serine protease DegS. | Hypothetical protein. | 0.443 |
SDH89662.1 | SDG80163.1 | SAMN05216605_10920 | SAMN05216605_103194 | Protein of unknown function. | Protein of unknown function. | 0.601 |
SDH89662.1 | SDI92622.1 | SAMN05216605_10920 | SAMN05216605_11919 | Protein of unknown function. | Hypothetical protein. | 0.419 |
SDI34779.1 | SDI92622.1 | SAMN05216605_112166 | SAMN05216605_11919 | Serine protease Do; Belongs to the peptidase S1C family. | Hypothetical protein. | 0.443 |
SDI92586.1 | SDI92622.1 | SAMN05216605_11918 | SAMN05216605_11919 | Transcriptional regulator, MarR family. | Hypothetical protein. | 0.540 |
SDI92622.1 | SDG19377.1 | SAMN05216605_11919 | SAMN05216605_101383 | Hypothetical protein. | Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. | 0.407 |
SDI92622.1 | SDG80163.1 | SAMN05216605_11919 | SAMN05216605_103194 | Hypothetical protein. | Protein of unknown function. | 0.536 |
SDI92622.1 | SDH83260.1 | SAMN05216605_11919 | SAMN05216605_108251 | Hypothetical protein. | Serine protease DegS. | 0.443 |
SDI92622.1 | SDH89662.1 | SAMN05216605_11919 | SAMN05216605_10920 | Hypothetical protein. | Protein of unknown function. | 0.419 |
SDI92622.1 | SDI34779.1 | SAMN05216605_11919 | SAMN05216605_112166 | Hypothetical protein. | Serine protease Do; Belongs to the peptidase S1C family. | 0.443 |
SDI92622.1 | SDI92586.1 | SAMN05216605_11919 | SAMN05216605_11918 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.540 |
SDI92622.1 | cysG | SAMN05216605_11919 | SAMN05216605_111179 | Hypothetical protein. | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.466 |
cysG | SDI92622.1 | SAMN05216605_111179 | SAMN05216605_11919 | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Hypothetical protein. | 0.466 |