Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG07739.1 | SDG10190.1 | SAMN05216605_10188 | SAMN05216605_101147 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Vanillate O-demethylase ferredoxin subunit. | 0.944 |
SDG07739.1 | SDG20600.1 | SAMN05216605_10188 | SAMN05216605_101412 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.953 |
SDG07739.1 | SDG54200.1 | SAMN05216605_10188 | SAMN05216605_102368 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.953 |
SDG07739.1 | SDH02680.1 | SAMN05216605_10188 | SAMN05216605_104141 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Ferredoxin-NADP reductase. | 0.944 |
SDG07739.1 | SDI70024.1 | SAMN05216605_10188 | SAMN05216605_11625 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.613 |
SDG07739.1 | SDJ00384.1 | SAMN05216605_10188 | SAMN05216605_12031 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Thioesterase domain-containing protein, putative. | 0.741 |
SDG07739.1 | SDJ00493.1 | SAMN05216605_10188 | SAMN05216605_12034 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.597 |
SDG07739.1 | SDJ00529.1 | SAMN05216605_10188 | SAMN05216605_12035 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.534 |
SDG10190.1 | SDG07739.1 | SAMN05216605_101147 | SAMN05216605_10188 | Vanillate O-demethylase ferredoxin subunit. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.944 |
SDG10190.1 | SDG20600.1 | SAMN05216605_101147 | SAMN05216605_101412 | Vanillate O-demethylase ferredoxin subunit. | Hypothetical protein. | 0.695 |
SDG10190.1 | SDG54200.1 | SAMN05216605_101147 | SAMN05216605_102368 | Vanillate O-demethylase ferredoxin subunit. | Hypothetical protein. | 0.695 |
SDG10190.1 | SDH02680.1 | SAMN05216605_101147 | SAMN05216605_104141 | Vanillate O-demethylase ferredoxin subunit. | Ferredoxin-NADP reductase. | 0.677 |
SDG10190.1 | SDJ00384.1 | SAMN05216605_101147 | SAMN05216605_12031 | Vanillate O-demethylase ferredoxin subunit. | Thioesterase domain-containing protein, putative. | 0.684 |
SDG20600.1 | SDG07739.1 | SAMN05216605_101412 | SAMN05216605_10188 | Hypothetical protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.953 |
SDG20600.1 | SDG10190.1 | SAMN05216605_101412 | SAMN05216605_101147 | Hypothetical protein. | Vanillate O-demethylase ferredoxin subunit. | 0.695 |
SDG20600.1 | SDG54200.1 | SAMN05216605_101412 | SAMN05216605_102368 | Hypothetical protein. | Hypothetical protein. | 0.793 |
SDG20600.1 | SDH02680.1 | SAMN05216605_101412 | SAMN05216605_104141 | Hypothetical protein. | Ferredoxin-NADP reductase. | 0.744 |
SDG20600.1 | SDJ00384.1 | SAMN05216605_101412 | SAMN05216605_12031 | Hypothetical protein. | Thioesterase domain-containing protein, putative. | 0.693 |
SDG54200.1 | SDG07739.1 | SAMN05216605_102368 | SAMN05216605_10188 | Hypothetical protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.953 |
SDG54200.1 | SDG10190.1 | SAMN05216605_102368 | SAMN05216605_101147 | Hypothetical protein. | Vanillate O-demethylase ferredoxin subunit. | 0.695 |
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