Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG07739.1 | SDG16709.1 | SAMN05216605_10188 | SAMN05216605_101320 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.678 |
SDG07739.1 | SDG17072.1 | SAMN05216605_10188 | SAMN05216605_101329 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.663 |
SDG07739.1 | SDH35099.1 | SAMN05216605_10188 | SAMN05216605_10634 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.577 |
SDG07739.1 | SDI73369.1 | SAMN05216605_10188 | SAMN05216605_116123 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.570 |
SDG07739.1 | SDJ00561.1 | SAMN05216605_10188 | SAMN05216605_12036 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.570 |
SDG07739.1 | SDJ16156.1 | SAMN05216605_10188 | SAMN05216605_12268 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.730 |
SDG07739.1 | SDJ16503.1 | SAMN05216605_10188 | SAMN05216605_12276 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | WbqC-like protein family protein. | 0.746 |
SDG07739.1 | SDJ16620.1 | SAMN05216605_10188 | SAMN05216605_12279 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glycosyl transferase family 2. | 0.789 |
SDG07739.1 | SDJ16692.1 | SAMN05216605_10188 | SAMN05216605_12281 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.874 |
SDG07739.1 | arnA | SAMN05216605_10188 | SAMN05216605_102334 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily. | 0.959 |
SDG16709.1 | SDG07739.1 | SAMN05216605_101320 | SAMN05216605_10188 | Hypothetical protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.678 |
SDG16709.1 | SDG17072.1 | SAMN05216605_101320 | SAMN05216605_101329 | Hypothetical protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.747 |
SDG16709.1 | SDJ16156.1 | SAMN05216605_101320 | SAMN05216605_12268 | Hypothetical protein. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.809 |
SDG16709.1 | SDJ16620.1 | SAMN05216605_101320 | SAMN05216605_12279 | Hypothetical protein. | Glycosyl transferase family 2. | 0.436 |
SDG16709.1 | SDJ16692.1 | SAMN05216605_101320 | SAMN05216605_12281 | Hypothetical protein. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.818 |
SDG16709.1 | arnA | SAMN05216605_101320 | SAMN05216605_102334 | Hypothetical protein. | UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily. | 0.476 |
SDG17072.1 | SDG07739.1 | SAMN05216605_101329 | SAMN05216605_10188 | Undecaprenyl-phosphate glucose phosphotransferase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.663 |
SDG17072.1 | SDG16709.1 | SAMN05216605_101329 | SAMN05216605_101320 | Undecaprenyl-phosphate glucose phosphotransferase. | Hypothetical protein. | 0.747 |
SDG17072.1 | SDH35099.1 | SAMN05216605_101329 | SAMN05216605_10634 | Undecaprenyl-phosphate glucose phosphotransferase. | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.740 |
SDG17072.1 | SDJ16156.1 | SAMN05216605_101329 | SAMN05216605_12268 | Undecaprenyl-phosphate glucose phosphotransferase. | Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase. | 0.694 |
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