STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP66325.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (318 aa)    
Predicted Functional Partners:
SEP66360.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SEP66395.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.999
SEQ33579.1
Nucleoside-binding protein.
 
 
 0.994
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
      0.593
SEP66292.1
Helix-turn-helix domain-containing protein.
       0.543
SEP66254.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.538
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
       0.495
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.