Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP80138.1 | SEP80161.1 | SAMN04488558_10278 | SAMN04488558_10279 | Endoribonuclease L-PSP. | Methionine-gamma-lyase. | 0.681 |
SEP80138.1 | guaA | SAMN04488558_10278 | SAMN04488558_1117 | Endoribonuclease L-PSP. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.745 |
SEP80138.1 | guaB | SAMN04488558_10278 | SAMN04488558_103137 | Endoribonuclease L-PSP. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.513 |
SEP80138.1 | surE | SAMN04488558_10278 | SAMN04488558_10277 | Endoribonuclease L-PSP. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.778 |
SEP80161.1 | SEP80138.1 | SAMN04488558_10279 | SAMN04488558_10278 | Methionine-gamma-lyase. | Endoribonuclease L-PSP. | 0.681 |
SEP80161.1 | guaA | SAMN04488558_10279 | SAMN04488558_1117 | Methionine-gamma-lyase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.766 |
SEP80161.1 | guaB | SAMN04488558_10279 | SAMN04488558_103137 | Methionine-gamma-lyase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.631 |
SEP80161.1 | surE | SAMN04488558_10279 | SAMN04488558_10277 | Methionine-gamma-lyase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.598 |
SEP84670.1 | SEQ08137.1 | SAMN04488558_102183 | SAMN04488558_10517 | Adenylosuccinate lyase. | CBS domain-containing protein. | 0.437 |
SEP84670.1 | cinA | SAMN04488558_102183 | SAMN04488558_101292 | Adenylosuccinate lyase. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.629 |
SEP84670.1 | guaA | SAMN04488558_102183 | SAMN04488558_1117 | Adenylosuccinate lyase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.943 |
SEP84670.1 | guaB | SAMN04488558_102183 | SAMN04488558_103137 | Adenylosuccinate lyase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.866 |
SEP84670.1 | pyrH | SAMN04488558_102183 | SAMN04488558_101128 | Adenylosuccinate lyase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.521 |
SEP84670.1 | surE | SAMN04488558_102183 | SAMN04488558_10277 | Adenylosuccinate lyase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.602 |
SEQ08137.1 | SEP84670.1 | SAMN04488558_10517 | SAMN04488558_102183 | CBS domain-containing protein. | Adenylosuccinate lyase. | 0.437 |
SEQ08137.1 | guaA | SAMN04488558_10517 | SAMN04488558_1117 | CBS domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.975 |
SEQ08137.1 | guaB | SAMN04488558_10517 | SAMN04488558_103137 | CBS domain-containing protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.938 |
SEQ08137.1 | surE | SAMN04488558_10517 | SAMN04488558_10277 | CBS domain-containing protein. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.636 |
cinA | SEP84670.1 | SAMN04488558_101292 | SAMN04488558_102183 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Adenylosuccinate lyase. | 0.629 |
cinA | surE | SAMN04488558_101292 | SAMN04488558_10277 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.921 |
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