Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP94803.1 | SEP94834.1 | SAMN04488558_103174 | SAMN04488558_103175 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Peptidase_C39 like family protein. | 0.737 |
SEP94803.1 | SEP94856.1 | SAMN04488558_103174 | SAMN04488558_103176 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | L-glutamine synthetase. | 0.545 |
SEP94803.1 | SEQ10153.1 | SAMN04488558_103174 | SAMN04488558_10572 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.593 |
SEP94803.1 | ldh | SAMN04488558_103174 | SAMN04488558_10370 | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.758 |
SEP94834.1 | SEP94803.1 | SAMN04488558_103175 | SAMN04488558_103174 | Peptidase_C39 like family protein. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.737 |
SEP94834.1 | SEP94856.1 | SAMN04488558_103175 | SAMN04488558_103176 | Peptidase_C39 like family protein. | L-glutamine synthetase. | 0.504 |
SEP94856.1 | SEP94803.1 | SAMN04488558_103176 | SAMN04488558_103174 | L-glutamine synthetase. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.545 |
SEP94856.1 | SEP94834.1 | SAMN04488558_103176 | SAMN04488558_103175 | L-glutamine synthetase. | Peptidase_C39 like family protein. | 0.504 |
SEQ10153.1 | SEP94803.1 | SAMN04488558_10572 | SAMN04488558_103174 | Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.593 |
ldh | SEP94803.1 | SAMN04488558_10370 | SAMN04488558_103174 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.758 |