STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP90179.1LysM domain-containing protein. (438 aa)    
Predicted Functional Partners:
SEP94834.1
Peptidase_C39 like family protein.
  
  
 0.746
SEQ55404.1
CHAP domain-containing protein.
  
    0.742
SEP65134.1
LysM domain-containing protein.
  
     0.715
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.677
SEQ52768.1
CpXC protein.
  
     0.653
SEP83311.1
Beta-lactamase class A.
  
     0.643
SEQ41858.1
O-antigen ligase.
 
     0.624
SEQ11780.1
N-terminal domain of peptidoglycan hydrolase CwlO-containing protein.
  
  
 0.608
SEQ17492.1
O-antigen ligase.
 
     0.586
SEP94206.1
Beta-lactamase enzyme family protein.
  
     0.585
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.