STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP92042.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SEP91930.1
Putative phage tail component, N-terminal domain-containing protein.
   
   0.907
SEQ38201.1
Hypothetical protein.
  
 0.846
SEP66430.1
DNA segregation ATPase FtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.828
SEP92010.1
Hypothetical protein.
       0.802
SEP91809.1
Lysophospholipase L1.
    
 0.797
SEP92069.1
Hypothetical protein.
       0.792
SEP92087.1
Hypothetical protein.
       0.792
SEP92119.1
Hypothetical protein.
       0.792
SEP92147.1
Phage protein Gp19/Gp15/Gp42.
       0.792
SEP92206.1
Phage major capsid protein, HK97 family.
       0.792
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.