STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcAArginine deiminase. (407 aa)    
Predicted Functional Partners:
SEQ05002.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 0.991
SEQ05100.1
Carbamate kinase; Belongs to the carbamate kinase family.
 
  
 0.934
SEP83649.1
Ornithine carbamoyltransferase.
 
 
 0.930
SEP83579.1
N-Dimethylarginine dimethylaminohydrolase.
 
  
 0.863
SEQ05067.1
Dipeptidase, putative.
  
 
 0.700
SEQ25923.1
Arginine:ornithine antiporter, APA family.
 
  
 0.689
hutG
Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
    
 0.668
SEQ07880.1
Arginine:ornithine antiporter, APA family.
 
  
 0.662
SEQ25889.1
Predicted amino acid racemase.
 
  
  0.629
SEQ11391.1
NADP-dependent alcohol dehydrogenase.
   
    0.604
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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