STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ02549.1Capsular polysaccharide biosynthesis protein. (248 aa)    
Predicted Functional Partners:
SEQ02580.1
Capsular exopolysaccharide family.
 
 0.995
SEQ02609.1
Protein-tyrosine phosphatase.
 
 
 0.988
SEQ02634.1
O-antigen biosynthesis protein WbqP.
 
  
 0.921
SEQ02514.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
  
 0.886
SEQ02730.1
UDP-glucose 4-epimerase.
  
  
 0.806
SEQ02479.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
 
  
 0.800
SEQ02783.1
Mannose-1-phosphate guanylyltransferase.
  
    0.728
SEQ02760.1
Phosphoglucomutase.
     
 0.711
SEQ03183.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.645
SEQ03039.1
Maltose O-acetyltransferase.
  
    0.607
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.