STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ08192.1Branched-chain amino acid transport system ATP-binding protein. (257 aa)    
Predicted Functional Partners:
SEQ08223.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SEQ08259.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SEQ08290.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.999
SEQ08172.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
0.998
SEQ47081.1
ABC-2 type transport system ATP-binding protein.
   
 
0.917
SEP94011.1
ABC-2 type transport system ATP-binding protein.
   
 
0.826
SEQ08137.1
CBS domain-containing protein.
 
    0.747
SEP57609.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
 
0.688
SEQ04092.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
 
0.687
SEQ50829.1
Putative hydroxymethylpyrimidine transport system permease protein.
    
  0.578
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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