Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP67645.1 | SEQ10401.1 | SAMN04488558_101330 | SAMN04488558_10579 | Zinc transporter, ZIP family. | Cytochrome c-type biogenesis protein. | 0.539 |
SEP99859.1 | SEQ10401.1 | SAMN04488558_10419 | SAMN04488558_10579 | Uroporphyrinogen III methyltransferase / synthase. | Cytochrome c-type biogenesis protein. | 0.429 |
SEP99859.1 | hemL | SAMN04488558_10419 | SAMN04488558_10434 | Uroporphyrinogen III methyltransferase / synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.994 |
SEQ10346.1 | SEQ10375.1 | SAMN04488558_10577 | SAMN04488558_10578 | Amino acid transporter. | Thiol-disulfide isomerase or thioredoxin. | 0.456 |
SEQ10346.1 | SEQ10401.1 | SAMN04488558_10577 | SAMN04488558_10579 | Amino acid transporter. | Cytochrome c-type biogenesis protein. | 0.447 |
SEQ10375.1 | SEQ10346.1 | SAMN04488558_10578 | SAMN04488558_10577 | Thiol-disulfide isomerase or thioredoxin. | Amino acid transporter. | 0.456 |
SEQ10375.1 | SEQ10401.1 | SAMN04488558_10578 | SAMN04488558_10579 | Thiol-disulfide isomerase or thioredoxin. | Cytochrome c-type biogenesis protein. | 0.960 |
SEQ10375.1 | SEQ10424.1 | SAMN04488558_10578 | SAMN04488558_10580 | Thiol-disulfide isomerase or thioredoxin. | Hypothetical protein. | 0.583 |
SEQ10375.1 | msrA | SAMN04488558_10578 | SAMN04488558_103133 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.579 |
SEQ10401.1 | SEP67645.1 | SAMN04488558_10579 | SAMN04488558_101330 | Cytochrome c-type biogenesis protein. | Zinc transporter, ZIP family. | 0.539 |
SEQ10401.1 | SEP99859.1 | SAMN04488558_10579 | SAMN04488558_10419 | Cytochrome c-type biogenesis protein. | Uroporphyrinogen III methyltransferase / synthase. | 0.429 |
SEQ10401.1 | SEQ10346.1 | SAMN04488558_10579 | SAMN04488558_10577 | Cytochrome c-type biogenesis protein. | Amino acid transporter. | 0.447 |
SEQ10401.1 | SEQ10375.1 | SAMN04488558_10579 | SAMN04488558_10578 | Cytochrome c-type biogenesis protein. | Thiol-disulfide isomerase or thioredoxin. | 0.960 |
SEQ10401.1 | SEQ10424.1 | SAMN04488558_10579 | SAMN04488558_10580 | Cytochrome c-type biogenesis protein. | Hypothetical protein. | 0.594 |
SEQ10401.1 | SEQ12408.1 | SAMN04488558_10579 | SAMN04488558_105128 | Cytochrome c-type biogenesis protein. | Thioredoxin reductase (NADPH). | 0.489 |
SEQ10401.1 | hemL | SAMN04488558_10579 | SAMN04488558_10434 | Cytochrome c-type biogenesis protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.487 |
SEQ10401.1 | msrA | SAMN04488558_10579 | SAMN04488558_103133 | Cytochrome c-type biogenesis protein. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.563 |
SEQ10401.1 | zupT | SAMN04488558_10579 | SAMN04488558_101195 | Cytochrome c-type biogenesis protein. | Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily. | 0.539 |
SEQ10424.1 | SEQ10375.1 | SAMN04488558_10580 | SAMN04488558_10578 | Hypothetical protein. | Thiol-disulfide isomerase or thioredoxin. | 0.583 |
SEQ10424.1 | SEQ10401.1 | SAMN04488558_10580 | SAMN04488558_10579 | Hypothetical protein. | Cytochrome c-type biogenesis protein. | 0.594 |
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