STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ18687.1Transcriptional regulator, RpiR family. (253 aa)    
Predicted Functional Partners:
SEP94319.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family /PTS system trehalose-specific IIA component, Glc family.
  
 
 0.947
SEQ18617.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
 
 
 0.862
SEQ18653.1
Maltose-6-phosphate glucosidase.
 
 
 0.854
SEQ18717.1
Hypothetical protein.
       0.773
SEQ01006.1
Maltose-6'-phosphate glucosidase.
 
 
 0.676
SEP84705.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.645
SEQ00971.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.645
SEQ01572.1
PTS system, glucose-specific IIC component.
  
 
 0.645
SEQ26892.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.645
SEQ30616.1
PTS system, sucrose-specific IIC component.
  
 
 0.645
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.