STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ24886.1iron(III) transport system permease protein. (553 aa)    
Predicted Functional Partners:
SEQ24851.1
iron(III) transport system substrate-binding protein.
 
 
 0.992
SEQ24812.1
iron(III) transport system ATP-binding protein.
 
 0.975
SEP91381.1
iron(III) transport system substrate-binding protein.
 
 
 0.971
SEP91243.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.881
SEP61434.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.852
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.763
SEP61464.1
Putative spermidine/putrescine transport system permease protein.
 
  
  0.761
SEP91276.1
iron(III) transport system permease protein.
 
  
 
0.681
SEP61495.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
  
  0.659
SEP61403.1
ABC-type spermidine/putrescine transport system, permease component I.
  
     0.619
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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