STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ32286.1PTS system IIC component, Gat family. (446 aa)    
Predicted Functional Partners:
SEQ32307.1
PTS system IIB component, Gat family.
 
 
 0.999
SEQ32230.1
PTS system IIA component, Gat family.
 
 
 0.995
SEQ32636.1
PTS system, galactitol-specific IIA component.
 
 
 0.987
SEQ42422.1
Phosphocarrier protein.
    
 0.952
SEQ31800.1
D-sorbitol 6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.837
SEQ01078.1
Transcriptional antiterminator, BglG family.
 
 
 0.806
SEQ31111.1
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.798
SEQ04775.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.792
SEQ01989.1
Hypothetical protein.
  
 
  0.792
SEQ47044.1
Gluconate 5-dehydrogenase.
  
 
  0.792
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.