STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ33515.1ATP-binding cassette, subfamily B, multidrug efflux pump. (598 aa)    
Predicted Functional Partners:
SEQ33546.1
ATP-binding cassette, subfamily B, multidrug efflux pump.
 
 
0.995
SEQ51899.1
ABC transporter.
 
    
0.913
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.899
SEP78060.1
Putative ABC transport system ATP-binding protein.
 
     
0.896
SEP81517.1
ATP-binding cassette, subfamily B, MsbA.
 
 
 
0.824
SEP67501.1
ATP-binding cassette, subfamily B.
 
 
0.751
SEQ03890.1
Putative ABC transport system ATP-binding protein.
     
0.740
SEQ33614.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.608
SEP82066.1
Putative ABC transport system ATP-binding protein.
     
0.567
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.