STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ36983.1Two-component signal transduction system YycFG, regulatory protein YycI. (276 aa)    
Predicted Functional Partners:
SEQ37021.1
Two-component signal transduction system YycFG, regulatory protein YycH.
 
  
 0.982
SEQ37135.1
PAS/PAC sensor signal transduction histidine kinase.
 
  
 0.856
SEQ37171.1
Two-component system, OmpR family, response regulator VicR.
  
  
 0.807
SEP81748.1
Protein involved in sex pheromone biosynthesis.
  
     0.750
SEP55904.1
Rod shape-determining protein MreD.
  
     0.738
SEQ42086.1
Thioredoxin.
  
     0.703
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.694
SEQ41683.1
Replication initiation and membrane attachment protein DnaB.
  
     0.684
SEP93656.1
Uncharacterized membrane-anchored protein.
  
     0.664
SEQ47111.1
Predicted ABC-type exoprotein transport system, permease component.
  
     0.662
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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