STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ54135.1General stress protein 13. (138 aa)    
Predicted Functional Partners:
SEP94319.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family /PTS system trehalose-specific IIA component, Glc family.
    
  0.931
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.899
SEP65576.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
  0.823
SEQ54099.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
  
 0.807
SEQ54066.1
Hypothetical protein.
 
     0.621
SEP64928.1
Small subunit ribosomal protein S1.
 
  
  0.611
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
    
  0.546
SEQ32172.1
Transketolase; Belongs to the transketolase family.
    
  0.525
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
  0.516
SEP66689.1
Glucokinase.
  
  
  0.507
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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