STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ISM_01455COG2025 Electron transfer flavoprotein, alpha subunit. (308 aa)    
Predicted Functional Partners:
ISM_01450
COG2086 Electron transfer flavoprotein, beta subunit.
 0.999
ISM_13185
Electrotransfer ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
ISM_06020
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
 
 
 0.952
ISM_04010
Putative glycolate oxidase; COG0277 FAD/FMN-containing dehydrogenases.
  
 0.946
ISM_05245
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.946
ISM_12240
Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 0.945
ISM_12680
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 0.945
ISM_14230
COG1960 Acyl-CoA dehydrogenases.
 
 0.945
ISM_11165
COG1960 Acyl-CoA dehydrogenases.
 
 0.940
ISM_10885
COG1960 Acyl-CoA dehydrogenases.
 
 0.937
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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