STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM_01455COG2025 Electron transfer flavoprotein, alpha subunit. (308 aa)    
Predicted Functional Partners:
ISM_01450
COG2086 Electron transfer flavoprotein, beta subunit.
 0.999
ISM_13185
Electrotransfer ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
ISM_14230
COG1960 Acyl-CoA dehydrogenases.
 0.980
ISM_11165
COG1960 Acyl-CoA dehydrogenases.
 0.978
ISM_10885
COG1960 Acyl-CoA dehydrogenases.
 0.977
ISM_06020
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
 
 
 
 0.968
ISM_04100
COG1960 Acyl-CoA dehydrogenases.
 0.967
ISM_09776
COG1960 Acyl-CoA dehydrogenases.
 0.967
ISM_12240
Hypothetical protein; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 
 0.964
ISM_12680
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
   
 
 0.964
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.