Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ISM_01780 | ISM_02220 | ISM_01780 | ISM_02220 | Hypothetical protein. | Hypothetical protein. | 0.621 |
ISM_01780 | ISM_04665 | ISM_01780 | ISM_04665 | Hypothetical protein. | COG3588 Fructose-1,6-bisphosphate aldolase. | 0.526 |
ISM_01780 | ISM_06675 | ISM_01780 | ISM_06675 | Hypothetical protein. | Phosphate acetyltransferase; COG0281 Malic enzyme. | 0.712 |
ISM_01780 | ISM_07080 | ISM_01780 | ISM_07080 | Hypothetical protein. | COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.719 |
ISM_01780 | ISM_09586 | ISM_01780 | ISM_09586 | Hypothetical protein. | Malate dehydrogenase; COG0281 Malic enzyme. | 0.658 |
ISM_01780 | ISM_13350 | ISM_01780 | ISM_13350 | Hypothetical protein. | COG0021 Transketolase; Belongs to the transketolase family. | 0.519 |
ISM_01780 | ISM_14135 | ISM_01780 | ISM_14135 | Hypothetical protein. | Mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.756 |
ISM_01780 | eno | ISM_01780 | ISM_16480 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.507 |
ISM_01780 | metG | ISM_01780 | ISM_11915 | Hypothetical protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.521 |
ISM_01780 | tpiA | ISM_01780 | ISM_15455 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.512 |
ISM_02220 | ISM_01780 | ISM_02220 | ISM_01780 | Hypothetical protein. | Hypothetical protein. | 0.621 |
ISM_04665 | ISM_01780 | ISM_04665 | ISM_01780 | COG3588 Fructose-1,6-bisphosphate aldolase. | Hypothetical protein. | 0.526 |
ISM_04665 | ISM_13350 | ISM_04665 | ISM_13350 | COG3588 Fructose-1,6-bisphosphate aldolase. | COG0021 Transketolase; Belongs to the transketolase family. | 0.942 |
ISM_04665 | eno | ISM_04665 | ISM_16480 | COG3588 Fructose-1,6-bisphosphate aldolase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.914 |
ISM_04665 | tpiA | ISM_04665 | ISM_15455 | COG3588 Fructose-1,6-bisphosphate aldolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.979 |
ISM_06675 | ISM_01780 | ISM_06675 | ISM_01780 | Phosphate acetyltransferase; COG0281 Malic enzyme. | Hypothetical protein. | 0.712 |
ISM_06675 | ISM_09586 | ISM_06675 | ISM_09586 | Phosphate acetyltransferase; COG0281 Malic enzyme. | Malate dehydrogenase; COG0281 Malic enzyme. | 0.798 |
ISM_06675 | ISM_13350 | ISM_06675 | ISM_13350 | Phosphate acetyltransferase; COG0281 Malic enzyme. | COG0021 Transketolase; Belongs to the transketolase family. | 0.810 |
ISM_06675 | eno | ISM_06675 | ISM_16480 | Phosphate acetyltransferase; COG0281 Malic enzyme. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.563 |
ISM_06675 | tpiA | ISM_06675 | ISM_15455 | Phosphate acetyltransferase; COG0281 Malic enzyme. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.459 |
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