Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_02410Carboxyl-terminal protease family protein; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. (444 aa)    
Predicted Functional Partners:
ISM_02405
Hypothetical protein; COG4942 Membrane-bound metallopeptidase.
  
  
 0.934
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.850
ISM_02345
NLP/P60 family protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
    
 
 0.750
ISM_03220
TPR domain protein; COG0457 FOG: TPR repeat.
  
 
 0.731
ISM_03225
Lipoprotein, putative; COG0457 FOG: TPR repeat.
  
 
 0.731
ISM_05205
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
    
 
 0.685
pheT
phenylalanyl-tRNA synthetase beta subunit; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.671
ISM_15195
Peptidase, M48 family protein; COG4783 Putative Zn-dependent protease, contains TPR repeats.
   
 
 0.659
ISM_16510
Peptidase, M48 family protein; COG0501 Zn-dependent protease with chaperone function.
   
 
 0.659
ISM_15780
Hypothetical protein.
   
 
 0.635
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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