STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM_05860Flagellar hook-length control protein. (452 aa)    
Predicted Functional Partners:
ISM_05855
Possible FlgD protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.998
ISM_01200
COG1868 Flagellar motor switch protein.
 
  
 0.987
ISM_11350
COG1536 Flagellar motor switch protein.
 
  
 0.967
ISM_17360
TraF protein; COG0840 Methyl-accepting chemotaxis protein.
  
  
 0.928
ISM_05265
Diguanylate cyclase, putative; COG2200 FOG: EAL domain.
   
  
 0.796
ISM_05865
Hypothetical protein.
 
     0.738
ISM_02460
COG1360 Flagellar motor protein.
  
  
 0.727
ISM_05870
Hypothetical protein.
 
     0.666
ISM_06925
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
  
 0.631
ISM_06625
Response regulator; COG0784 FOG: CheY-like receiver.
  
  
 0.618
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.