Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_06270Chloramphenicol acetyltransferase, putative; COG0110 Acetyltransferase (isoleucine patch superfamily). (205 aa)    
Predicted Functional Partners:
ISM_06275
COG3639 ABC-type phosphate/phosphonate transport system, permease component.
 
     0.852
ISM_06280
COG3639 ABC-type phosphate/phosphonate transport system, permease component.
 
     0.840
ISM_06285
COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
     0.800
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     0.704
ISM_06245
Alkylphosphonate utilization protein PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
     0.693
ISM_06240
Alkylphosphonate utilization protein PhnK; COG4107 ABC-type phosphonate transport system, ATPase component.
 
     0.692
ISM_06235
Alkylphosphonate utilization protein PhnL; COG4778 ABC-type phosphonate transport system, ATPase component.
 
     0.690
ISM_06250
Alkylphosphonate utilization protein PhnI; COG3626 Uncharacterized enzyme of phosphonate metabolism.
 
     0.680
ISM_06255
Alkylphosphonate utilization protein PhnH; COG3625 Uncharacterized enzyme of phosphonate metabolism.
 
     0.667
ISM_06225
Alkylphosphonate utilization protein PhnM; COG3454 Metal-dependent hydrolase involved in phosphonate metabolism.
 
     0.658
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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