Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_07100COG3409 Putative peptidoglycan-binding domain-containing protein. (158 aa)    
Predicted Functional Partners:
ISM_09596
Hypothetical protein; COG1204 Superfamily II helicase.
 
  
  0.818
ISM_07940
Membrane protein, putative.
  
     0.763
ISM_02485
Hypothetical protein; COG1372 Intein/homing endonuclease.
  
     0.758
ISM_14350
Hypothetical protein.
  
     0.752
ISM_00750
Lipoprotein, putative.
  
     0.732
ISM_15925
Hypothetical protein.
  
     0.730
ISM_07200
Hypothetical protein.
  
     0.728
ISM_07110
Hypothetical protein.
 
     0.671
ISM_12440
Lipoprotein, putative.
  
     0.666
ISM_02045
Hypothetical protein.
  
     0.664
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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