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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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Score
ISM_07700Saccharopine dehydrogenase, putative; COG0686 Alanine dehydrogenase. (347 aa)    
Predicted Functional Partners:
ISM_15805
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.870
ISM_07710
Phosphoglycerate mutase family protein; COG0406 Fructose-2,6-bisphosphatase.
 
     0.820
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.779
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.736
ISM_07705
Glutathione S-transferase, putative; COG0625 Glutathione S-transferase.
       0.734
ISM_06675
Phosphate acetyltransferase; COG0281 Malic enzyme.
    
 0.685
ISM_09586
Malate dehydrogenase; COG0281 Malic enzyme.
    
 0.685
ISM_03915
2-oxoisovalerate dehydrogenase beta subunit; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
     
  0.617
ISM_16955
Possible 2-oxoisovalerate dehydrogenase; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
     
  0.617
ISM_04010
Putative glycolate oxidase; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.615
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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