STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM_07705Glutathione S-transferase, putative; COG0625 Glutathione S-transferase. (205 aa)    
Predicted Functional Partners:
ISM_02050
COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
  
  
  0.895
gshB
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.
  
  
 0.850
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.844
ISM_07725
COG0625 Glutathione S-transferase.
 
  
 
0.843
ISM_02900
Hypothetical protein; COG0625 Glutathione S-transferase.
  
  
 0.834
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.827
ISM_12135
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
    
 0.823
ISM_09811
Hypothetical protein; COG0625 Glutathione S-transferase.
  
  
  0.813
ISM_14260
COG0625 Glutathione S-transferase.
  
  
 
0.796
ISM_07710
Phosphoglycerate mutase family protein; COG0406 Fructose-2,6-bisphosphatase.
       0.787
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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