Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_09035COG3821 Predicted membrane protein. (243 aa)    
Predicted Functional Partners:
ISM_09040
Hypothetical protein.
 
     0.816
ISM_09025
Putative glycolate oxidase subunit protein; COG0277 FAD/FMN-containing dehydrogenases.
       0.689
ISM_09020
Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
       0.686
ISM_09030
Glycolate oxidase, GlcD subunit; COG0277 FAD/FMN-containing dehydrogenases.
       0.551
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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