Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_09906Glycosyl transferase, group 2 family protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. (621 aa)    
Predicted Functional Partners:
ISM_00035
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
 0.835
ISM_06845
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
  
 0.813
ISM_06720
COG1192 ATPases involved in chromosome partitioning.
  
 
 0.794
ISM_08465
Hypothetical protein; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.775
ISM_05265
Diguanylate cyclase, putative; COG2200 FOG: EAL domain.
  
 
 0.760
ISM_14135
Mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.739
ISM_17685
RepA partitioning protein/ATPase, ParA type; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.670
ISM_06480
COG2003 DNA repair proteins; Belongs to the UPF0758 family.
  
    0.666
ISM_15265
COG0440 Acetolactate synthase, small (regulatory) subunit.
  
 0.659
carA
COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
       0.611
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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