Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ISM_09936MobC protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (196 aa)    
Predicted Functional Partners:
ISM_09941
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
 0.533
ISM_09946
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.513
ISM_09931
Acyltransferase family protein; COG2937 Glycerol-3-phosphate O-acyltransferase.
       0.495
infB
Translation initiation factor IF-2.
  
     0.483
ISM_09951
COG5488 Integral membrane protein.
 
     0.455
ISM_04415
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
    
 0.429
ISM_12675
COG1396 Predicted transcriptional regulators.
    
 0.429
ISM_13530
Hypothetical protein.
  
     0.408
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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