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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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ISM_10965Pca operon transcriptional activator PcaQ; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
ISM_10940
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.854
pcaH
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.818
ISM_10960
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
     0.769
pcaC
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
     0.729
ISM_07480
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.682
ISM_10955
3-oxoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.651
ISM_10935
Hypothetical protein.
 
     0.595
ISM_02990
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.571
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.556
ISM_10975
Hypothetical protein.
 
     0.542
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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