lcdH protein (Roseovarius nubinhibens) - STRING interaction network

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Score

lcdH

3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. (470 aa)

Predicted Functional Partners:

ISM_16740

0.997

ISM_11165

0.957

ISM_11150

0.902

ISM_11175

0.896

ISM_11155

0.881

ISM_02055

0.855

ISM_04080

0.855

ISM_06905

0.855

ISM_07230

0.855

ISM_09491

0.855

Your Current Organism:

Roseovarius nubinhibens

NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ISM_02055	ISM_06905	ISM_02055	ISM_06905	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.689
ISM_02055	ISM_09491	ISM_02055	ISM_09491	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.688
ISM_02055	ISM_11165	ISM_02055	ISM_11165	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	COG1960 Acyl-CoA dehydrogenases.	0.715
ISM_02055	ISM_11175	ISM_02055	ISM_11175	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	carnitinyl-CoA dehydratase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.829
ISM_02055	ISM_16740	ISM_02055	ISM_16740	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.	0.837
ISM_02055	lcdH	ISM_02055	ISM_11160	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.	0.855
ISM_04080	ISM_11165	ISM_04080	ISM_11165	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	COG1960 Acyl-CoA dehydrogenases.	0.579
ISM_04080	ISM_11175	ISM_04080	ISM_11175	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	carnitinyl-CoA dehydratase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.829
ISM_04080	ISM_16740	ISM_04080	ISM_16740	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.	0.837
ISM_04080	lcdH	ISM_04080	ISM_11160	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.	0.855
ISM_06905	ISM_02055	ISM_06905	ISM_02055	Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.689
ISM_06905	ISM_09491	ISM_06905	ISM_09491	Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.663
ISM_06905	ISM_11165	ISM_06905	ISM_11165	Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	COG1960 Acyl-CoA dehydrogenases.	0.728
ISM_06905	ISM_11175	ISM_06905	ISM_11175	Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	carnitinyl-CoA dehydratase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.829
ISM_06905	ISM_16740	ISM_06905	ISM_16740	Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.	0.837
ISM_06905	lcdH	ISM_06905	ISM_11160	Beta-ketothiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.	0.855
ISM_07230	ISM_11165	ISM_07230	ISM_11165	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	COG1960 Acyl-CoA dehydrogenases.	0.579
ISM_07230	ISM_11175	ISM_07230	ISM_11175	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	carnitinyl-CoA dehydratase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.829
ISM_07230	ISM_16740	ISM_07230	ISM_16740	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.	0.837
ISM_07230	lcdH	ISM_07230	ISM_11160	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.	0.855

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