STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM_11475Hypothetical protein. (298 aa)    
Predicted Functional Partners:
ISM_11470
COG3853 Uncharacterized protein involved in tellurite resistance; Belongs to the TelA family.
 
  
 0.992
ISM_11465
Lipoprotein, putative.
 
     0.893
ISM_11460
COG4260 Putative virion core protein (lumpy skin disease virus).
 
     0.876
ISM_11455
Hypothetical protein.
 
     0.849
ISM_14035
Phasin, PhaP.
  
     0.663
ISM_11520
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.640
ISM_09806
Hypothetical protein.
  
     0.636
ISM_11490
COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
     
 0.624
ISM_16540
RDD family protein; COG1714 Predicted membrane protein/domain.
 
     0.587
ISM_14590
Hypothetical protein.
  
     0.544
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.