STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM_12790Hypothetical protein. (113 aa)    
Predicted Functional Partners:
ISM_05160
Hypothetical protein.
  
 
 0.911
ISM_05170
Hypothetical protein.
   
   0.903
ISM_12825
Hypothetical protein.
  
 
 0.887
ISM_12775
Putative phage-related protein.
  
 
 0.838
ISM_12795
Hypothetical protein.
  
    0.821
ISM_12800
Hypothetical protein.
       0.810
ISM_12770
COG0616 Periplasmic serine proteases (ClpP class).
  
 
 0.795
ISM_12785
Hypothetical protein.
       0.795
ISM_12805
Hypothetical protein.
       0.772
ISM_12765
COG4695 Phage-related protein.
  
   0.769
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.