Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ISM_12945Hypothetical protein. (160 aa)    
Predicted Functional Partners:
ISM_15295
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
     0.768
ISM_15300
TRAP transporter, DctM subunit, putative; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
     0.765
ISM_06485
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
  
     0.613
ISM_12940
COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
       0.605
ISM_15285
COG4564 Signal transduction histidine kinase.
  
     0.468
ISM_14340
Hypothetical protein; COG0527 Aspartokinases.
  
     0.460
ISM_09726
Hypothetical protein.
  
     0.445
ISM_00750
Lipoprotein, putative.
  
     0.442
ISM_15965
Hypothetical protein; COG0591 Na+/proline symporter.
  
     0.441
ISM_04995
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
  
     0.436
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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