Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ISM_13415Lipoprotein, putative. (175 aa)    
Predicted Functional Partners:
ISM_13420
Fe-S metabolism associated family protein; COG2166 SufE protein probably involved in Fe-S center assembly.
       0.680
ISM_15405
Hypothetical protein.
  
     0.677
ISM_06455
Hypothetical protein.
  
     0.655
ISM_01945
Hypothetical protein.
  
     0.642
ISM_13195
Hypothetical protein.
  
     0.635
ISM_15965
Hypothetical protein; COG0591 Na+/proline symporter.
  
     0.626
ISM_14795
Hypothetical protein.
  
     0.617
ISM_09826
Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B.
  
     0.603
ISM_00535
Hypothetical protein.
  
     0.592
ISM_00310
Hypothetical protein.
  
     0.582
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.