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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
ISM_14560Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins. (837 aa)    
Predicted Functional Partners:
ISM_07370
Mannuronan C-5-epimerase, putative; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  0.846
ISM_08270
Calcium binding hemolysin protein, putative; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  0.811
ISM_14555
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.789
ISM_11725
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
  0.768
ISM_17795
Y4BN.
 
 0.767
ISM_06395
Type I secretion target repeat protein.
 
 
0.673
ISM_07005
core-2/I-branching enzyme family protein.
  
     0.666
ISM_10126
FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
 
 0.648
ISM_08625
Hypothetical protein.
    
 0.647
ISM_02030
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.643
Your Current Organism:
Roseovarius nubinhibens
NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM
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