xerC-2 protein (Roseovarius nubinhibens) - STRING interaction network

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xerC-2

Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (314 aa)

Predicted Functional Partners:

ISM_14590

0.803

ISM_14595

0.778

ISM_06565

0.690

rpsF

0.682

ISM_10126

0.673

rpoC

0.668

rpmJ

0.655

rpsU

0.644

rpmE

0.642

rplD

0.641

Your Current Organism:

Roseovarius nubinhibens

NCBI taxonomy Id: 89187
Other names: R. nubinhibens ISM, Roseobacter sp. ISM, Roseovarius nubinhibens ISM, Roseovarius nubinhibens str. ISM, Roseovarius nubinhibens strain ISM, marine bacterium ISM

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ISM_06565	xerC-2	ISM_06565	ISM_14585	Competence protein F, putative; COG1040 Predicted amidophosphoribosyltransferases.	Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.	0.690
ISM_10126	rpoC	ISM_10126	ISM_01890	FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.809
ISM_10126	xerC-2	ISM_10126	ISM_14585	FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.	Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.	0.673
ISM_14590	ISM_14595	ISM_14590	ISM_14595	Hypothetical protein.	Hypothetical protein.	0.839
ISM_14590	xerC-2	ISM_14590	ISM_14585	Hypothetical protein.	Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.	0.803
ISM_14595	ISM_14590	ISM_14595	ISM_14590	Hypothetical protein.	Hypothetical protein.	0.839
ISM_14595	xerC-2	ISM_14595	ISM_14585	Hypothetical protein.	Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.	0.778
rplD	rpmE	ISM_01830	ISM_08775	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.909
rplD	rpmJ	ISM_01830	ISM_07155	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.989
rplD	rpoC	ISM_01830	ISM_01890	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rplD	rpsF	ISM_01830	ISM_01160	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.990
rplD	rpsU	ISM_01830	ISM_09200	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.927
rplD	xerC-2	ISM_01830	ISM_14585	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.	0.641
rpmE	rplD	ISM_08775	ISM_01830	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.909
rpmE	rpmJ	ISM_08775	ISM_07155	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.944
rpmE	rpoC	ISM_08775	ISM_01890	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.988
rpmE	rpsF	ISM_08775	ISM_01160	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.962
rpmE	rpsU	ISM_08775	ISM_09200	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.969
rpmE	xerC-2	ISM_08775	ISM_14585	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.	0.642
rpmJ	rplD	ISM_07155	ISM_01830	COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.989

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